random line from file
Aug 14, 2013 at 6:57am UTC
Hello all,
Intro
I'm trying to read in a file and randomly grab a line. The file "Spiral_Periods_5.dat" has 6 columns and millions of lines and the size is around 100 gigabytes:
37.3253288 34.6592178 2.68544000E+10 1.14858511E-03 3.11963275E+16 2.68544205E+10
.....
.....
Eventually I want to save the randomly selected line to a file if the last column is less than 2000.
Attempt
I'm having all kinds of trouble seeking to a random line, yet alone parsing the line. I'm trying to seekg to a random spot but I don't know how to make it get the beginning of the line.
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#include <iostream> // std::cout
#include <fstream> // std::ifstream
#include <cstdlib>
#include <string>
using namespace std;
int main () {
srand(time(0)); //seed for randomness
ifstream in ("Spiral_Periods_5.dat" );
if (in) {
// get length of file:
in.seekg (0, in.end);
int length = in.tellg();
in.seekg (0, in.beg);
// alocate memory:
//cout << length<< endl;
string line;
getline (in,line);
int line_length = line.length();
//cout << line_length << endl;
int randomPlace = ((rand()%length+1));
//cout << randomPlace << endl;
//in.seekg (0, in.beg);
in.seekg (randomPlace);
getline (in, line);
cout << line << endl;
}
return 0;
}
I just can't seem to calculate the correct multiples in line 21 for the seekg to move to the beginning of a line.
Thanks for all the help :)
Aug 14, 2013 at 7:36am UTC
> I just can't seem to calculate the correct multiples in line 21 for the seekg to move to the beginning of a line.
To read a line, use
std::getline()
http://www.cplusplus.com/reference/string/string/getline/
To parse the line and get the value of the last column into a double, use
std::istringstream
Divide and conquer: break up the code into small functions, each of which is easy to write, read and understand.
For instance (untested):
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#include <string>
#include <fstream>
#include <sstream>
#include <ctime>
#include <random>
std::string get_last_col( const std::string& line )
{
auto pos = line.find_last_of( " \t\n" ) ;
return line.substr( pos == std::string::npos ? 0 : pos ) ;
}
bool is_eligible( const std::string& col, double ubound = 2000.0 )
{
std::istringstream stm(col) ;
double d ;
return stm >> d >> std::ws && d < ubound && stm.eof() ;
}
std::istream& get_eligible_line( std::istream& stm, std::string& line )
{
std::string temp ;
while ( std::getline( stm, temp ) )
{
if ( is_eligible( get_last_col(temp) ) )
{
line = temp ;
return stm ;
}
}
return stm ;
}
std::string random_eligible_line( const char * path2file )
{
static std::mt19937 twister( std::time(0) ) ;
std::string selected ;
std::ifstream file(path2file) ;
std::string line ;
std::streamsize nlines = 0 ;
while ( get_eligible_line( file, line ) )
{
++nlines ;
// select this line with probability 1/nlines
if ( std::uniform_int_distribution<std::streamsize>( 0, nlines )(twister) == 0 )
selected = line ;
}
return selected ;
}
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